Photorhabdus sp. S10-54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S10-54 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This species is noteworthy for possessing a single replicon, a feature that can impact its genetic stability and replication processes. Its genomic information is catalogued under the accession number NSCJ00000000.1, which provides a basis for further research and characterization. The presence of flagella in Photorhabdus sp. S10-54 suggests that it may exhibit mobility in various environments, which could be advantageous for survival and colonization. Gram-negative bacteria, such as this species, typically have a complex cell wall structure that includes an outer membrane, which may play a role in antibiotic resistance and interactions with other microorganisms. Photorhabdus species are often associated with insect pathogens, particularly in relation to entomopathogenic nematodes. This ecological relationship highlights the potential role of Photorhabdus sp. S10-54 in biological control processes, where it may contribute to the regulation of insect populations. The specific traits of Photorhabdus sp. S10-54 suggest that it could be an important player in its ecosystem, potentially influencing both microbial dynamics and pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S10-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S10-54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S10-54 S10_54_scf0197, whole genome shotgun

Gene Summary

Adenine Count

1540164 bp

Thymine Count

1518102 bp

Guanine Count

1120122 bp

Cytosine Count

1135579 bp

Genome Length

5314371 bp

Protein-coding Genes

4179 genes

Non-Coding Genes

422 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c maturation protein ccmeCKY05_09675Not AvailablePositive2187246 - 218774018618.7
heme lyase nrfefg subunit nrfeCKY05_09680Not AvailablePositive2187737 - 218970774042.1
dsbe family thiol:disulfide interchange proteinCKY05_09685Not AvailablePositive2189704 - 219025820822.6
cytochrome c-type biogenesis protein ccmhCKY05_09690Not AvailablePositive2190255 - 219071617750.7
c-type cytochrome biogenesis protein ccmiCKY05_09695Not AvailablePositive2190716 - 219115016268.1
magnesium transporter coraCKY05_09700Not AvailableNegative2191418 - 219236836548.9
dna helicase iiCKY05_09705Not AvailableNegative2192464 - 219463582150.0
flavin mononucleotide phosphataseCKY05_09710Not AvailableNegative2194693 - 219540927086.6
tyrosine recombinase xercCKY05_09715Not AvailableNegative2195412 - 219632034578.8
duf484 family proteinCKY05_09720Not AvailableNegative2196317 - 219702126881.8

Displaying genes 2081 – 2090 of 4601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.