Photorhabdus sp. S10-54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S10-54 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This species is noteworthy for possessing a single replicon, a feature that can impact its genetic stability and replication processes. Its genomic information is catalogued under the accession number NSCJ00000000.1, which provides a basis for further research and characterization. The presence of flagella in Photorhabdus sp. S10-54 suggests that it may exhibit mobility in various environments, which could be advantageous for survival and colonization. Gram-negative bacteria, such as this species, typically have a complex cell wall structure that includes an outer membrane, which may play a role in antibiotic resistance and interactions with other microorganisms. Photorhabdus species are often associated with insect pathogens, particularly in relation to entomopathogenic nematodes. This ecological relationship highlights the potential role of Photorhabdus sp. S10-54 in biological control processes, where it may contribute to the regulation of insect populations. The specific traits of Photorhabdus sp. S10-54 suggest that it could be an important player in its ecosystem, potentially influencing both microbial dynamics and pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S10-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S10-54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S10-54 S10_54_scf0197, whole genome shotgun

Gene Summary

Adenine Count

1540164 bp

Thymine Count

1518102 bp

Guanine Count

1120122 bp

Cytosine Count

1135579 bp

Genome Length

5314371 bp

Protein-coding Genes

4179 genes

Non-Coding Genes

422 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCKY05_06290Not AvailablePositive1464784 - 146511913371.6
dna polymerase iiCKY05_06295Not AvailablePositive1465459 - 146780790617.7
rna polymerase-associated protein rapaCKY05_06300Not AvailablePositive1468003 - 1470915111050.0
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaCKY05_06305Not AvailablePositive1471010 - 147166024960.0
hypothetical proteinCKY05_06310Not AvailableNegative1471661 - 14718406748.6
co-chaperone djlaCKY05_06315Not AvailableNegative1471897 - 147271831134.9
lps assembly protein lptdCKY05_06320Not AvailablePositive1472903 - 147522788867.0
peptidylprolyl isomerase suraCKY05_06325Not AvailablePositive1475307 - 147660848458.1
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCKY05_06330Not AvailablePositive1476586 - 147760536337.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseCKY05_06335Not AvailablePositive1477598 - 147841630476.0

Displaying genes 1501 – 1510 of 4601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.