Photorhabdus sp. S10-54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus sp. S10-54 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This species is noteworthy for possessing a single replicon, a feature that can impact its genetic stability and replication processes. Its genomic information is catalogued under the accession number NSCJ00000000.1, which provides a basis for further research and characterization. The presence of flagella in Photorhabdus sp. S10-54 suggests that it may exhibit mobility in various environments, which could be advantageous for survival and colonization. Gram-negative bacteria, such as this species, typically have a complex cell wall structure that includes an outer membrane, which may play a role in antibiotic resistance and interactions with other microorganisms. Photorhabdus species are often associated with insect pathogens, particularly in relation to entomopathogenic nematodes. This ecological relationship highlights the potential role of Photorhabdus sp. S10-54 in biological control processes, where it may contribute to the regulation of insect populations. The specific traits of Photorhabdus sp. S10-54 suggest that it could be an important player in its ecosystem, potentially influencing both microbial dynamics and pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus sp. S10-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus sp. S10-54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus sp. S10-54 S10_54_scf0197, whole genome shotgun

Gene Summary

Adenine Count

1540164 bp

Thymine Count

1518102 bp

Guanine Count

1120122 bp

Cytosine Count

1135579 bp

Genome Length

5314371 bp

Protein-coding Genes

4179 genes

Non-Coding Genes

422 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-octaprenyl-4-hydroxybenzoate carboxy-lyaseCKY05_03275Not AvailableNegative689671 - 69025521334.0
amidophosphoribosyltransferaseCKY05_03280Not AvailableNegative690302 - 69181956446.2
colicin v production proteinCKY05_03285Not AvailableNegative691834 - 69234018884.2
cell division protein deddCKY05_03290Not AvailableNegative692542 - 69322524521.8
bifunctional tetrahydrofolate synthase/dihydrofolate synthaseCKY05_03295Not AvailableNegative693215 - 69451347356.8
acetyl-coa carboxylase carboxyl transferase subunit betaCKY05_03300Not AvailableNegative694506 - 69545034301.9
hypothetical proteinCKY05_03305Not AvailableNegative695553 - 69624226059.6
trna pseudouridine(38-40) synthase truaCKY05_03310Not AvailableNegative696289 - 69712531172.4
aspartate-semialdehyde dehydrogenaseCKY05_03315Not AvailableNegative697125 - 69813536544.5
4-phosphoerythronate dehydrogenase pdxbCKY05_03320Not AvailableNegative698187 - 69931441180.7

Displaying genes 1011 – 1020 of 4601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.