Gordonia polyisoprenivorans strain herm_1 000001F

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans strain herm_1 000001F is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This motility may contribute to its ecological adaptability in various environments. The strain is defined by a single replicon, indicating a streamlined genomic organization that could influence its metabolic efficiency and reproduction. The genomic sequence of Gordonia polyisoprenivorans strain herm_1 000001F is accessible under the accession number NQOE00000000.1, providing a resource for further genetic and functional studies. This accession represents a foundational step in understanding the genetic makeup and potential applications of this strain. In terms of ecological significance, the presence of flagella suggests a capability for movement toward favorable conditions or away from adverse ones, which could enhance its survival in diverse habitats. The unique traits of this strain may also allow it to play a role in bioremediation processes, particularly in environments contaminated with isoprenoid compounds, given the species' name and its implications regarding polyisoprenoid degradation. Overall, the traits of Gordonia polyisoprenivorans strain herm_1 000001F highlight its potential adaptability and functional importance within microbial communities and environmental bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
Strainstrain herm_1 000001F

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans strain herm_1 000001F, whole genome

Gene Summary

Adenine Count

1023737 bp

Thymine Count

1018832 bp

Guanine Count

2066476 bp

Cytosine Count

2071467 bp

Genome Length

6180512 bp

Protein-coding Genes

5337 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pig-l family deacetylaseCJJ17_25520Not AvailablePositive5718227 - 571888324389.1
nad-dependent dehydrataseCJJ17_25525Not AvailablePositive5718893 - 571992136444.2
dtdp-4-dehydrorhamnose 3,5-epimeraseCJJ17_25530Not AvailableNegative5719905 - 572045620337.8
transferaseCJJ17_25535Not AvailablePositive5720471 - 572159839548.1
glutamate-1-semialdehyde 2,1-aminomutaseCJJ17_25540Not AvailablePositive5721595 - 572294748172.7
diguanylate phosphodiesteraseCJJ17_25545Not AvailablePositive5723103 - 572428742372.3
hypothetical proteinCJJ17_25550Not AvailablePositive5724544 - 572533529182.8
thiamine biosynthesis protein thifCJJ17_25555Not AvailableNegative5725294 - 572644541450.0
ggdef domain-containing proteinCJJ17_25560Not AvailableNegative5726528 - 572769740863.5
eal domain-containing proteinCJJ17_25565Not AvailablePositive5728216 - 572940042039.8

Displaying genes 4981 – 4990 of 5396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.