Gordonia polyisoprenivorans VH2

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans VH2

NC_016907.1NC_016906.1

Gene Summary

Adenine Count

29317 bp

Thymine Count

30475 bp

Guanine Count

58710 bp

Cytosine Count

55992 bp

Genome Length

174494 bp

Protein-coding Genes

164 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is256 family transposaseGPOL_RS25240Q8R967-180 - 145846438.3
c-terminal binding proteinGPOL_RS25245A1RYE4-1489 - 222326075.1
is256 family transposaseGPOL_RS27440Not Available-2516 - 302718403.7
is256 family transposaseGPOL_RS27445P64937+3081 - 364021148.4
is256 family transposaseGPOL_RS25265P0CF88+3780 - 484738815.5
is256 family transposaseGPOL_RS26545Not Available-5429 - 652640077.2
is256 family transposaseGPOL_RS27450Not Available+6775 - 69848108.58
alpha/beta fold hydrolaseGPOL_RS25280Q6Q2C2-6954 - 784731467.9
is110 family transposaseGPOL_RS25285P55626+7954 - 903639540.1
marr family winged helix-turn-helix transcriptional regulatorGPOL_RS25290Not Available-9442 - 991817530.3

Displaying genes 1 – 10 of 5246 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

9 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000751(S,S)-butane-2,3-diolC4H10O2Chemical structure of (S,S)-butane-2,3-diolNot available
Average90.121Da
Monoisotopic90.06807956Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm00024581D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideC14H25NO11Chemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideNot available
Average383.35Da
Monoisotopic383.142760629Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003852arseno-mycothiolC17H29AsN2O15SChemical structure of arseno-mycothiolNot available
Average608.4Da
Monoisotopic608.051557Da

Displaying 1–9 of 9 metabolites