Gordonia polyisoprenivorans strain herm_1 000001F

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans strain herm_1 000001F is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This motility may contribute to its ecological adaptability in various environments. The strain is defined by a single replicon, indicating a streamlined genomic organization that could influence its metabolic efficiency and reproduction. The genomic sequence of Gordonia polyisoprenivorans strain herm_1 000001F is accessible under the accession number NQOE00000000.1, providing a resource for further genetic and functional studies. This accession represents a foundational step in understanding the genetic makeup and potential applications of this strain. In terms of ecological significance, the presence of flagella suggests a capability for movement toward favorable conditions or away from adverse ones, which could enhance its survival in diverse habitats. The unique traits of this strain may also allow it to play a role in bioremediation processes, particularly in environments contaminated with isoprenoid compounds, given the species' name and its implications regarding polyisoprenoid degradation. Overall, the traits of Gordonia polyisoprenivorans strain herm_1 000001F highlight its potential adaptability and functional importance within microbial communities and environmental bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
Strainstrain herm_1 000001F

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans strain herm_1 000001F, whole genome

Gene Summary

Adenine Count

1023737 bp

Thymine Count

1018832 bp

Guanine Count

2066476 bp

Cytosine Count

2071467 bp

Genome Length

6180512 bp

Protein-coding Genes

5337 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonate-semialdehyde dehydrogenase (coa acylating)CJJ17_21595Not AvailablePositive4806400 - 480789652160.0
nitrate reductaseCJJ17_21600Not AvailablePositive4807921 - 480942953377.9
serine/threonine protein kinaseCJJ17_21605Not AvailableNegative4809451 - 481113658775.4
hsp20/alpha crystallin family proteinCJJ17_21610Not AvailableNegative4811379 - 481186117648.6
nitrate abc transporter substrate-binding proteinCJJ17_21615Not AvailableNegative4811970 - 481313941182.7
abc transporter atp-binding proteinCJJ17_21620Not AvailablePositive4813480 - 481425627851.9
abc transporter permeaseCJJ17_21625Not AvailablePositive4814253 - 481517332490.7
2og-fe(ii) oxygenaseCJJ17_21630Not AvailablePositive4815213 - 481625337618.3
gntr family transcriptional regulatorCJJ17_21635Not AvailablePositive4816276 - 481692623896.6
alkaline phosphatase family proteinCJJ17_21640Not AvailablePositive4816958 - 481816342022.1

Displaying genes 4211 – 4220 of 5396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.