Gordonia polyisoprenivorans strain herm_1 000001F

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans strain herm_1 000001F is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This motility may contribute to its ecological adaptability in various environments. The strain is defined by a single replicon, indicating a streamlined genomic organization that could influence its metabolic efficiency and reproduction. The genomic sequence of Gordonia polyisoprenivorans strain herm_1 000001F is accessible under the accession number NQOE00000000.1, providing a resource for further genetic and functional studies. This accession represents a foundational step in understanding the genetic makeup and potential applications of this strain. In terms of ecological significance, the presence of flagella suggests a capability for movement toward favorable conditions or away from adverse ones, which could enhance its survival in diverse habitats. The unique traits of this strain may also allow it to play a role in bioremediation processes, particularly in environments contaminated with isoprenoid compounds, given the species' name and its implications regarding polyisoprenoid degradation. Overall, the traits of Gordonia polyisoprenivorans strain herm_1 000001F highlight its potential adaptability and functional importance within microbial communities and environmental bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
Strainstrain herm_1 000001F

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans strain herm_1 000001F, whole genome

Gene Summary

Adenine Count

1023737 bp

Thymine Count

1018832 bp

Guanine Count

2066476 bp

Cytosine Count

2071467 bp

Genome Length

6180512 bp

Protein-coding Genes

5337 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdCJJ17_01905Not AvailablePositive409228 - 41103062532.7
protein translocase subunit secfCJJ17_01910Not AvailablePositive411027 - 41226243604.5
abc transporter substrate-binding proteinCJJ17_01915Not AvailablePositive412325 - 41402858743.8
adenine phosphoribosyltransferaseCJJ17_01920Not AvailablePositive414025 - 41462720202.3
pbs lyase heat domain-containing protein repeat-containing proteinCJJ17_01925Not AvailablePositive414654 - 41536725889.7
rela/spot family proteinCJJ17_01930Not AvailablePositive415536 - 41795688950.4
peptidyl-prolyl cis-trans isomeraseCJJ17_01935Not AvailableNegative418010 - 41911338326.7
mbl fold metallo-hydrolaseCJJ17_01940Not AvailablePositive419329 - 42006025153.9
histidine--trna ligaseCJJ17_01945Not AvailablePositive420057 - 42132245497.1
duf885 domain-containing proteinCJJ17_01950Not AvailableNegative421376 - 42303159081.7

Displaying genes 381 – 390 of 5396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.