Gordonia polyisoprenivorans strain herm_1 000001F

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans strain herm_1 000001F is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This motility may contribute to its ecological adaptability in various environments. The strain is defined by a single replicon, indicating a streamlined genomic organization that could influence its metabolic efficiency and reproduction. The genomic sequence of Gordonia polyisoprenivorans strain herm_1 000001F is accessible under the accession number NQOE00000000.1, providing a resource for further genetic and functional studies. This accession represents a foundational step in understanding the genetic makeup and potential applications of this strain. In terms of ecological significance, the presence of flagella suggests a capability for movement toward favorable conditions or away from adverse ones, which could enhance its survival in diverse habitats. The unique traits of this strain may also allow it to play a role in bioremediation processes, particularly in environments contaminated with isoprenoid compounds, given the species' name and its implications regarding polyisoprenoid degradation. Overall, the traits of Gordonia polyisoprenivorans strain herm_1 000001F highlight its potential adaptability and functional importance within microbial communities and environmental bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
Strainstrain herm_1 000001F

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans strain herm_1 000001F, whole genome

Gene Summary

Adenine Count

1023737 bp

Thymine Count

1018832 bp

Guanine Count

2066476 bp

Cytosine Count

2071467 bp

Genome Length

6180512 bp

Protein-coding Genes

5337 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosyl-3-phosphoglycerate synthaseCJJ17_00905Not AvailablePositive197894 - 19886834100.7
ump kinaseCJJ17_00910Not AvailablePositive199041 - 19978126713.5
ribosome-recycling factorCJJ17_00915Not AvailablePositive199868 - 20042520604.6
phosphatidate cytidylyltransferaseCJJ17_00920Not AvailablePositive200514 - 20145832906.4
duf1049 domain-containing proteinCJJ17_00925Not AvailableNegative201501 - 20186912868.7
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCJJ17_00930Not AvailablePositive201900 - 20301240061.7
duf2631 domain-containing proteinCJJ17_00935Not AvailableNegative203112 - 20340210605.7
allantoinase puueCJJ17_00940Not AvailablePositive203582 - 20455336570.8
1-deoxy-d-xylulose-5-phosphate reductoisomeraseCJJ17_00945Not AvailablePositive204813 - 20598540500.5
zinc metalloproteaseCJJ17_00950Not AvailablePositive206057 - 20728943959.8

Displaying genes 181 – 190 of 5396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.