Shigella boydii strain ECH+23

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii strain ECH+23 is a Gram-negative rod-shaped bacterium that is primarily associated with hosts, specifically Homo sapiens and Metazoa. This organism is classified as a chemoorganotroph, relying on organic compounds for energy. It exhibits a facultative anaerobic metabolism, allowing it to thrive in both the presence and absence of oxygen. The strain is characterized by a cell arrangement that can be observed in pairs or as single cells. Notably, Shigella boydii ECH+23 possesses flagella, although it is non-motile, indicating a potential adaptation for its ecological niche. It has a mesophilic temperature range, with an optimal growth temperature of 37°C, which coincides with the average human body temperature, reinforcing its association with human hosts. Shigella boydii is known to cause shigellosis, a significant health concern characterized by gastrointestinal symptoms. The bacterium has one replicon and is surrounded by two membranes, which is typical for Gram-negative bacteria. Its free-living biotic relationship suggests that while it can exist independently, it is primarily pathogenic when associated with its hosts. The ecological insight here is that the successful adaptation of Shigella boydii strain ECH+23 to the human host, alongside its ability to exploit a range of environmental conditions, underscores its role in human health and disease dynamics. This adaptability may contribute to its persistence and pathogenicity within human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
Strainstrain ECH+23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii strain ECH+23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella boydii strain ECH+23

Gene Summary

Adenine Count

1363604 bp

Thymine Count

1359058 bp

Guanine Count

1371975 bp

Cytosine Count

1387578 bp

Genome Length

5482215 bp

Protein-coding Genes

5169 genes

Non-Coding Genes

380 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiber componentCI719_29170Not AvailableNegative5475258 - 547600128209.4
Phage minor tail protein lCI719_29175Not AvailableNegative5476007 - 547670525834.4
Putative minor tail proteinCI719_29180Not AvailableNegative5476705 - 547703412615.2
Putative tail length tape measure protein precursorCI719_29185Not AvailableNegative5477031 - 547777726089.9
recombinaseCI719_00005Not AvailablePositive7 - 1867155.58
5s ribosomal rnaNot AvailableNot AvailablePositive68 - 183Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive88 - 3016Not Available
theronine dehydrogenaseCI719_00010Not AvailablePositive183 - 49712139.6
hok/gef family proteinCI719_00020Not AvailablePositive706 - 8675946.51
50s ribosomal protein l31CI719_00025Not AvailableNegative1475 - 16877871.49

Displaying genes 351 – 360 of 5549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC5177732

Displaying health effects 1 – 1 of 1 in total