Escherichia coli strain ECSW+04

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECSW+04 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and exhibits a unique cell arrangement in pairs and singles. ECSW+04 is predominantly host-associated, demonstrating a free-living biotic relationship with a diverse range of hosts, including Homo sapiens, various livestock such as Bos taurus and Sus scrofa, as well as other vertebrates and plants like Solanum lycopersicum and Brassica oleracea var. italica. Notably, this strain is associated with a wide array of health effects, particularly in humans, where it is implicated in urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The strain's pathogenicity is predominantly human-centric, but it also affects other species, including livestock and pets, indicating its potential for zoonotic transmission. The presence of ECSW+04 in diverse ecological niches and its ability to cause significant health issues underscore its ecological versatility and importance. Understanding its interactions within various hosts and environments can provide valuable insights into its role in disease dynamics and potential impacts on public health, especially in relation to foodborne infections and cross-species transmission.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECSW+04

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECSW+04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECSW+04


Gene Summary

Adenine Count

1364904 bp

Thymine Count

1371449 bp

Guanine Count

1395199 bp

Cytosine Count

1378666 bp

Genome Length

5510218 bp

Protein-coding Genes

5270 genes

Non-Coding Genes

453 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinCI694_01705Not AvailableNegative288153 - 28953249962.6
Tail proteinCI694_01710Not AvailableNegative289529 - 29016424643.4
Baseplate j/gp47 family proteinCI694_01715Not AvailableNegative290161 - 29134543542.6
Hypothetical proteinCI694_01720Not AvailableNegative291338 - 29168812876.4
Putative tail length determinatorCI694_01725Not AvailableNegative291678 - 29385276754.2
Hypothetical proteinCI694_01730Not AvailableNegative294040 - 29432710835.0
M15 family peptidaseCI694_01735Not AvailableNegative294398 - 29473912885.1
HolinCI694_01740Not AvailableNegative294849 - 29514510395.9
Putative tail tube proteinCI694_01745Not AvailableNegative295149 - 29560416273.3
Tail sheathCI694_01750Not AvailableNegative295601 - 29674941267.3

Displaying genes 1 – 10 of 5723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total