Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECSW+04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364904 bp
Thymine Count
1371449 bp
Guanine Count
1395199 bp
Cytosine Count
1378666 bp
Genome Length
5510218 bp
Protein-coding Genes
5270 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | CI694_28455 | Not Available | Negative | 5143004 - 5144014 | 35124.6 |
| hydrogenase formation protein hypd | CI694_28460 | Not Available | Negative | 5144011 - 5145132 | 41393.7 |
| hydrogenase assembly protein hypc | CI694_28465 | Not Available | Negative | 5145132 - 5145404 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein hypb | CI694_28470 | Not Available | Negative | 5145395 - 5146267 | 31566.8 |
| protein hypa | CI694_28475 | Not Available | Negative | 5146271 - 5146621 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | CI694_28480 | Not Available | Positive | 5146833 - 5147294 | 17627.9 |
| hypothetical protein | CI694_28485 | Not Available | Negative | 5147210 - 5147518 | 11335.6 |
| formate hydrogenlyase subunit 2 | CI694_28490 | Not Available | Positive | 5147419 - 5148030 | 21874.4 |
| formate hydrogenlyase subunit 3 | CI694_28495 | Not Available | Positive | 5148027 - 5149853 | 64127.2 |
| hydrogenase 3 membrane subunit | CI694_28500 | Not Available | Positive | 5149856 - 5150779 | 33065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





