Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECSW+04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364904 bp
Thymine Count
1371449 bp
Guanine Count
1395199 bp
Cytosine Count
1378666 bp
Genome Length
5510218 bp
Protein-coding Genes
5270 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | CI694_13545 | Not Available | Negative | 2426974 - 2428749 | 64980.3 |
| l-fucose:h+ symporter permease | CI694_13550 | Not Available | Negative | 2428782 - 2430098 | 47574.7 |
| l-fuculose-phosphate aldolase | CI694_13555 | Not Available | Positive | 2430645 - 2431292 | 23776.7 |
| lactaldehyde reductase | CI694_13560 | Not Available | Positive | 2431320 - 2432468 | 40515.7 |
| flap endonuclease xni | CI694_13565 | Not Available | Negative | 2432523 - 2433278 | 28167.7 |
| l-serine ammonia-lyase | CI694_13570 | Not Available | Negative | 2433390 - 2434757 | 48755.8 |
| serine transporter | CI694_13575 | Not Available | Negative | 2434815 - 2436104 | 46909.2 |
| log family protein ygdh | CI694_13580 | Not Available | Negative | 2436661 - 2438025 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | CI694_13585 | Not Available | Negative | 2438137 - 2438985 | 32560.1 |
| protein syd | CI694_13590 | Not Available | Positive | 2439053 - 2439598 | 20709.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





