Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECSW+04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364904 bp
Thymine Count
1371449 bp
Guanine Count
1395199 bp
Cytosine Count
1378666 bp
Genome Length
5510218 bp
Protein-coding Genes
5270 genes
Non-Coding Genes
453 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | CI694_09695 | Not Available | Positive | 1724322 - 1725293 | 36282.1 |
| trap transporter small permease | CI694_09700 | Not Available | Positive | 1725357 - 1725830 | 17822.7 |
| trap transporter large permease | CI694_09705 | Not Available | Positive | 1725827 - 1727098 | 45441.2 |
| methyl-accepting chemotaxis protein ii | CI694_09710 | Not Available | Negative | 1727141 - 1728796 | 59407.5 |
| homoprotocatechuate degradation operon regulator hpar | CI694_09715 | Not Available | Negative | 1728915 - 1729415 | 19526.7 |
| 4-hydroxyphenylacetate degradation protein | CI694_09720 | Not Available | Positive | 1729627 - 1730922 | 47303.3 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | CI694_09725 | Not Available | Positive | 1730919 - 1732385 | 53058.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | CI694_09730 | Not Available | Positive | 1732387 - 1733238 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CI694_09735 | Not Available | Positive | 1733248 - 1733628 | 14276.2 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | CI694_09740 | Not Available | Positive | 1733739 - 1734542 | 29716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





