Rhodococcus sp. 06-412-2C RS1E7_31

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. 06-412-2C RS1E7_31 is a notable strain within the genus Rhodococcus, characterized by the presence of flagella, indicating its potential motility. This trait may confer advantages in various environments, allowing the organism to navigate and colonize different ecological niches effectively. The strain possesses a single replicon, which simplifies its genomic structure and may influence its replication and genetic stability. The genomic information for Rhodococcus sp. 06-412-2C is accessible under the accession number NOYG00000000.1, providing a foundational reference for further studies on its genetic makeup and functional capabilities. In ecological contexts, Rhodococcus species are known for their metabolic versatility, often playing significant roles in the biodegradation of complex organic compounds. The presence of flagella in this strain suggests that it may engage actively in biodegradation processes, potentially aiding in the breakdown of pollutants in contaminated environments. This motility can enhance the organism's ability to access substrates and interact with other microorganisms, contributing to bioremediation efforts. Overall, Rhodococcus sp. 06-412-2C RS1E7_31, with its flagella and single replicon, represents a valuable organism for studying microbial dynamics in environmental contexts, particularly in relation to biodegradation and ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. 06-412-2C
StrainRS1E7_31

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. 06-412-2C RS1E7_31, whole genome shotgun sequence.

Gene Summary

Adenine Count

1114836 bp

Thymine Count

1120352 bp

Guanine Count

1996706 bp

Cytosine Count

1981194 bp

Genome Length

6213489 bp

Protein-coding Genes

5725 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arabinofuranosidaseCH254_15170Not AvailableNegative3128671 - 312960333406.9
hypothetical proteinCH254_15175Not AvailableNegative3129717 - 313148662901.4
3-oxoacyl-acp synthaseCH254_15180Not AvailablePositive3131513 - 313268541130.6
zinc-ribbon domain-containing proteinCH254_15185Not AvailableNegative3132696 - 31328997858.65
formaldehyde dehydrogenase, glutathione-independentCH254_15190Not AvailableNegative3133007 - 313422442050.3
ribulokinaseCH254_15195Not AvailablePositive3134492 - 313616559599.5
l-ribulose-5-phosphate 4-epimeraseCH254_15200Not AvailablePositive3136162 - 313683924193.8
l-arabinose isomeraseCH254_15205Not AvailablePositive3136879 - 313836353955.4
hydroxyacid dehydrogenaseCH254_15210Not AvailableNegative3138422 - 313942035692.5
2,3-dimethylmalate lyaseCH254_15215Not AvailableNegative3139451 - 314031730566.2

Displaying genes 2991 – 3000 of 5778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.