Amycolatopsis antarctica strain AU-G6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis antarctica strain AU-G6 is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This feature is significant as it may enable the organism to navigate its environment effectively, potentially enhancing its ability to find nutrients or evade unfavorable conditions. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in specific ecological niches. Such a genomic configuration can be advantageous for survival in the often extreme environments associated with Antarctica, where resource availability can be limited. The strain is cataloged under the accession number NKYE00000000.1, which allows for its genetic and phenotypic information to be easily referenced in scientific databases. This accessibility aids researchers in studying its characteristics and potential applications in biotechnology or environmental microbiology. Biologically, the traits of Amycolatopsis antarctica strain AU-G6 suggest it could play a role in the biogeochemical cycles of its native ecosystem. Its motility might contribute to nutrient cycling by enabling the bacterium to interact with various substrates in its environment. This interaction may also have implications for microbial community dynamics, particularly in polar regions where microbial life is crucial for ecosystem functioning. Thus, understanding this strain could provide insights into the resilience and adaptability of microbial life in extreme habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis antarctica
Strainstrain AU-G6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis antarctica strain AU-G6


Gene Summary

Adenine Count

935491 bp

Thymine Count

945949 bp

Guanine Count

2238294 bp

Cytosine Count

2223019 bp

Genome Length

6342753 bp

Protein-coding Genes

5495 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive11 - 127Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive119 - 1644Not Available
oxidoreductaseCFN78_00005Not AvailableNegative387 - 112125215.1
tetr family transcriptional regulatorCFN78_00010Not AvailableNegative1230 - 182021012.1
23s ribosomal rnaNot AvailableNot AvailablePositive1923 - 5060Not Available
nitroreductase family deazaflavin-dependent oxidoreductaseCFN78_00015Not AvailablePositive2236 - 273918474.9
merr family transcriptional regulatorCFN78_00020Not AvailablePositive2808 - 317314021.8
hypothetical proteinCFN78_00025Not AvailableNegative3062 - 351716338.3
peptidoglycan-binding proteinCFN78_00030Not AvailableNegative3632 - 445028136.8
5s ribosomal rnaNot AvailableNot AvailablePositive5177 - 5293Not Available

Displaying genes 1 – 10 of 5554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.