Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase recx | CFN78_04920 | Not Available | Positive | 1042672 - 1043208 | 19996.8 |
| keto-deoxy-phosphogluconate aldolase | CFN78_04925 | Not Available | Negative | 1043260 - 1043883 | 20767.2 |
| phosphogluconate dehydratase | CFN78_04930 | Not Available | Negative | 1043946 - 1045823 | 65567.5 |
| hypothetical protein | CFN78_04935 | Not Available | Positive | 1046270 - 1046560 | 10716.5 |
| hypothetical protein | CFN78_04940 | Not Available | Positive | 1046557 - 1047390 | 31031.8 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | CFN78_04945 | Not Available | Positive | 1047441 - 1049354 | 69980.4 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | CFN78_04950 | Not Available | Positive | 1049354 - 1050106 | 28823.4 |
| sam-dependent methyltransferase | CFN78_04955 | Not Available | Negative | 1050111 - 1050845 | 26555.2 |
| amino acid abc transporter permease | CFN78_04960 | Not Available | Negative | 1051034 - 1051900 | 31279.2 |
| amino acid abc transporter permease | CFN78_04965 | Not Available | Negative | 1051897 - 1052544 | 23302.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
