Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene dehydrogenase | CFN78_04820 | Not Available | Negative | 1017931 - 1019442 | 53597.3 |
| geranylgeranyl pyrophosphate synthase | CFN78_04825 | Not Available | Negative | 1019445 - 1020581 | 39232.2 |
| glcnac-pi de-n-acetylase | CFN78_04830 | Not Available | Positive | 1020702 - 1021505 | 29218.2 |
| 5,10-methylenetetrahydrofolate reductase | CFN78_04835 | Not Available | Positive | 1021584 - 1022468 | 32116.3 |
| duf885 domain-containing protein | CFN78_04840 | Not Available | Positive | 1022510 - 1024207 | 62309.2 |
| gnat family n-acetyltransferase | CFN78_04845 | Not Available | Negative | 1024328 - 1024891 | 21256.3 |
| aminoacyl-trna deacylase | CFN78_04850 | Not Available | Negative | 1024914 - 1025420 | 17040.2 |
| hypothetical protein | CFN78_04855 | Not Available | Positive | 1025857 - 1026303 | 15688.6 |
| hypothetical protein | CFN78_04860 | Not Available | Positive | 1026303 - 1027073 | 28295.3 |
| short-chain dehydrogenase | CFN78_04865 | Not Available | Negative | 1027295 - 1028251 | 32866.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
