Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | CFN78_04460 | Not Available | Positive | 940907 - 941416 | 17804.5 |
| esterase | CFN78_04465 | Not Available | Positive | 941432 - 942259 | 28893.4 |
| sam-dependent methyltransferase | CFN78_04470 | Not Available | Negative | 942288 - 943340 | 38319.8 |
| phosphoesterase | CFN78_04475 | Not Available | Positive | 943446 - 944534 | 36868.1 |
| mate family efflux transporter | CFN78_04480 | Not Available | Positive | 944616 - 945950 | 45912.0 |
| mfs transporter | CFN78_04485 | Not Available | Positive | 946093 - 947454 | 47260.4 |
| trna pseudouridine(55) synthase trub | CFN78_04490 | Not Available | Positive | 947475 - 948389 | 31635.9 |
| riboflavin biosynthesis protein ribf | CFN78_04495 | Not Available | Positive | 948430 - 949413 | 35082.6 |
| transcriptional regulator | CFN78_04500 | Not Available | Positive | 949545 - 950024 | 17224.9 |
| rna 2',3'-cyclic phosphodiesterase | CFN78_04505 | Not Available | Positive | 950037 - 950669 | 21797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
