Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sortase | CFN78_04055 | Not Available | Positive | 842800 - 843411 | 20721.3 |
| glycine--trna ligase | CFN78_04060 | Not Available | Positive | 843518 - 844903 | 52645.9 |
| hypothetical protein | CFN78_04065 | Not Available | Positive | 845048 - 845701 | 22983.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | CFN78_04070 | Not Available | Positive | 845742 - 847016 | 45644.0 |
| hit family protein | CFN78_04075 | Not Available | Positive | 847016 - 847468 | 16282.5 |
| serpin family protein | CFN78_04080 | Not Available | Positive | 847509 - 848627 | 39183.4 |
| glycosyl transferase | CFN78_04085 | Not Available | Positive | 848677 - 850467 | 63862.7 |
| marr family transcriptional regulator | CFN78_04090 | Not Available | Negative | 851449 - 851916 | 16983.0 |
| rna polymerase sigma factor sigj | CFN78_04095 | Not Available | Negative | 852092 - 853021 | 33439.1 |
| dna primase | CFN78_04100 | Not Available | Positive | 853020 - 854969 | 71215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
