Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | CFN78_02775 | Not Available | Positive | 568704 - 569024 | 11719.6 |
| succinyldiaminopimelate transaminase | CFN78_02780 | Not Available | Positive | 569021 - 570115 | 38250.7 |
| metal-chelation protein chad | CFN78_02785 | Not Available | Negative | 570130 - 571128 | 36123.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CFN78_02790 | Not Available | Negative | 571219 - 572226 | 34039.2 |
| hypothetical protein | CFN78_02795 | Not Available | Negative | 572255 - 572707 | 15442.4 |
| succinyl-diaminopimelate desuccinylase | CFN78_02800 | Not Available | Positive | 572786 - 573880 | 38000.9 |
| rossman fold protein, tigr00730 family | CFN78_02805 | Not Available | Positive | 573973 - 574755 | 28515.7 |
| rossman fold protein, tigr00730 family | CFN78_02810 | Not Available | Positive | 574758 - 575321 | 19742.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CFN78_02815 | Not Available | Negative | 575358 - 576029 | 24317.6 |
| glucosyl-3-phosphoglycerate synthase | CFN78_02820 | Not Available | Positive | 576077 - 577003 | 32761.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
