Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 38602 - 38678 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 38704 - 38780 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 38801 - 38873 | Not Available |
| alpha/beta hydrolase | CFN78_00205 | Not Available | Positive | 39025 - 39912 | 32354.1 |
| hypothetical protein | CFN78_00210 | Not Available | Negative | 39948 - 40184 | 8316.58 |
| hypothetical protein | CFN78_00215 | Not Available | Positive | 40695 - 41189 | 18179.0 |
| cold-shock protein | CFN78_00220 | Not Available | Negative | 41288 - 41491 | 7461.7 |
| l,d-transpeptidase | CFN78_00225 | Not Available | Positive | 42058 - 43212 | 40608.0 |
| hypothetical protein | CFN78_00230 | Not Available | Positive | 43317 - 43709 | 12439.3 |
| sige family rna polymerase sigma factor | CFN78_00235 | Not Available | Positive | 43714 - 44271 | 20583.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
