Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | CFN78_01405 | Not Available | Positive | 263695 - 264096 | 14213.1 |
| 30s ribosomal protein s4 | CFN78_01410 | Not Available | Positive | 264120 - 264725 | 22986.0 |
| dna-directed rna polymerase subunit alpha | CFN78_01415 | Not Available | Positive | 264844 - 265917 | 38417.4 |
| 50s ribosomal protein l17 | CFN78_01420 | Not Available | Positive | 265998 - 266699 | 25062.4 |
| trna pseudouridine(38-40) synthase trua | CFN78_01425 | Not Available | Positive | 266696 - 267610 | 33192.4 |
| hypothetical protein | CFN78_01430 | Not Available | Negative | 267615 - 268514 | 33732.2 |
| is5/is1182 family transposase | CFN78_01435 | Not Available | Positive | 268725 - 269542 | 30331.9 |
| hypothetical protein | CFN78_01440 | Not Available | Negative | 269621 - 270343 | 25469.1 |
| type vii secretion protein ecce | CFN78_01445 | Not Available | Negative | 270340 - 271575 | 43053.1 |
| hypothetical protein | CFN78_01450 | Not Available | Positive | 271574 - 271942 | 11024.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
