Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase | CFN78_09350 | Not Available | Negative | 1997933 - 1998409 | 16162.6 |
| rna polymerase subunit sigma | CFN78_09355 | Not Available | Positive | 1998717 - 1999352 | 24069.4 |
| mycothiol system anti-sigma-r factor | CFN78_09360 | Not Available | Positive | 1999349 - 1999690 | 12685.8 |
| atpase | CFN78_09365 | Not Available | Positive | 2000226 - 2001782 | 55687.6 |
| whib family transcriptional regulator | CFN78_09370 | Not Available | Negative | 2002131 - 2002385 | 9181.74 |
| diacylglycerol kinase | CFN78_09375 | Not Available | Negative | 2002669 - 2003595 | 32914.4 |
| hypothetical protein | CFN78_09380 | Not Available | Positive | 2004006 - 2004485 | 16199.7 |
| hypothetical protein | CFN78_09385 | Not Available | Negative | 2004510 - 2004899 | 12760.7 |
| aminoglycoside phosphotransferase | CFN78_09390 | Not Available | Negative | 2004926 - 2006140 | 41737.9 |
| gnat family n-acetyltransferase | CFN78_09395 | Not Available | Negative | 2006332 - 2006826 | 18242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
