Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFN78_08270 | Not Available | Positive | 1750135 - 1751211 | 35883.2 |
| transcriptional regulator | CFN78_08275 | Not Available | Negative | 1751221 - 1751607 | 14387.3 |
| nad-dependent epimerase | CFN78_08280 | Not Available | Positive | 1751705 - 1752352 | 22361.3 |
| f420-dependent oxidoreductase | CFN78_08285 | Not Available | Negative | 1752355 - 1753224 | 31457.0 |
| ribose-phosphate pyrophosphokinase | CFN78_08290 | Not Available | Negative | 1753372 - 1754352 | 35756.9 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | CFN78_08295 | Not Available | Negative | 1754356 - 1755813 | 50389.4 |
| ggdef domain-containing protein | CFN78_08300 | Not Available | Negative | 1755857 - 1757560 | 60945.2 |
| Trna-gln | Not Available | Not Available | Positive | 1757649 - 1757720 | Not Available |
| acyl-coa desaturase | CFN78_08310 | Not Available | Positive | 1757969 - 1758934 | 35733.2 |
| tetr family transcriptional regulator | CFN78_08315 | Not Available | Positive | 1759133 - 1759732 | 22095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
