Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CFN78_08115 | Not Available | Positive | 1712393 - 1713382 | 33972.3 |
| sugar abc transporter atp-binding protein | CFN78_08120 | Not Available | Positive | 1713379 - 1714194 | 28622.8 |
| nucleoside/nucleotide kinase family protein | CFN78_08125 | Not Available | Positive | 1714226 - 1714837 | 22075.5 |
| propionyl-coa synthetase | CFN78_08135 | Not Available | Negative | 1716702 - 1718579 | 67691.5 |
| serine/threonine protein kinase | CFN78_08140 | Not Available | Positive | 1718785 - 1720551 | 62460.1 |
| gnat family n-acetyltransferase | CFN78_08145 | Not Available | Positive | 1720611 - 1721858 | 45490.1 |
| chitinase | CFN78_08150 | Not Available | Negative | 1721908 - 1722921 | 34709.6 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | CFN78_08155 | Not Available | Negative | 1723150 - 1724721 | 57999.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CFN78_08160 | Not Available | Positive | 1724821 - 1725687 | 30612.6 |
| aminodeoxychorismate synthase component i | CFN78_08165 | Not Available | Negative | 1725714 - 1726997 | 44944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
