Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFN78_07800 | Not Available | Positive | 1622392 - 1622685 | 11072.2 |
| thioesterase | CFN78_07805 | Not Available | Positive | 1622758 - 1623567 | 29721.3 |
| gdp-mannose 4,6-dehydratase | CFN78_07810 | Not Available | Positive | 1623564 - 1624595 | 38431.1 |
| ferredoxin-1 | CFN78_07815 | Not Available | Negative | 1624666 - 1624875 | 7061.15 |
| aminotransferase | CFN78_07820 | Not Available | Negative | 1624912 - 1625967 | 38663.4 |
| mgt family glycosyltransferase | CFN78_07825 | Not Available | Negative | 1625964 - 1627427 | 53957.4 |
| hypothetical protein | CFN78_07830 | Not Available | Negative | 1627565 - 1628182 | 22601.2 |
| ndp-hexose 2,3-dehydratase | CFN78_07835 | Not Available | Positive | 1628980 - 1630419 | 53372.1 |
| oxidoreductase | CFN78_07840 | Not Available | Positive | 1630416 - 1631417 | 36457.6 |
| nad-dependent epimerase/dehydratase | CFN78_07845 | Not Available | Positive | 1631417 - 1632187 | 27855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
