Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | CFN78_07700 | Not Available | Positive | 1602472 - 1602861 | 14209.1 |
| hypothetical protein | CFN78_07705 | Not Available | Positive | 1602861 - 1604372 | 53082.2 |
| dna-protecting protein dpra | CFN78_07710 | Not Available | Positive | 1604369 - 1605532 | 39664.4 |
| recombinase xerc | CFN78_07715 | Not Available | Positive | 1605621 - 1606784 | 40972.5 |
| flia/whig family rna polymerase sigma factor | CFN78_07720 | Not Available | Positive | 1606969 - 1607709 | 27578.1 |
| peptidase | CFN78_07725 | Not Available | Negative | 1608235 - 1608978 | 25521.3 |
| 30s ribosomal protein s2 | CFN78_07730 | Not Available | Positive | 1609159 - 1610025 | 31561.8 |
| translation elongation factor ts | CFN78_07735 | Not Available | Positive | 1610119 - 1610934 | 29157.6 |
| ump kinase | CFN78_07740 | Not Available | Positive | 1611042 - 1611788 | 26536.0 |
| ribosome recycling factor | CFN78_07745 | Not Available | Positive | 1611888 - 1612445 | 20720.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
