Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf397 domain-containing protein | CFN78_07150 | Not Available | Positive | 1475783 - 1476067 | 10549.9 |
| phosphoglycerate dehydrogenase | CFN78_07155 | Not Available | Positive | 1476270 - 1477868 | 54981.9 |
| peptidase s8 | CFN78_07160 | Not Available | Positive | 1478284 - 1481718 | 116343.0 |
| 3-isopropylmalate dehydrogenase | CFN78_07165 | Not Available | Positive | 1481982 - 1483031 | 37107.1 |
| citramalate synthase | CFN78_07170 | Not Available | Positive | 1483353 - 1485014 | 58695.5 |
| peptidase s1 | CFN78_07175 | Not Available | Negative | 1485004 - 1485681 | 21726.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | CFN78_07180 | Not Available | Positive | 1485782 - 1486552 | 26857.0 |
| hypothetical protein | CFN78_07185 | Not Available | Negative | 1486625 - 1487866 | 45098.0 |
| glutamate--trna ligase | CFN78_07190 | Not Available | Positive | 1487978 - 1489462 | 54676.8 |
| had family hydrolase | CFN78_07195 | Not Available | Positive | 1489633 - 1490334 | 25537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
