Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | CFN78_05420 | Not Available | Negative | 1155670 - 1156284 | 22530.2 |
| acyl-coa dehydrogenase | CFN78_05425 | Not Available | Positive | 1156398 - 1157549 | 41856.8 |
| carnitine dehydratase | CFN78_05430 | Not Available | Positive | 1157642 - 1158826 | 40915.1 |
| transcriptional regulator | CFN78_05435 | Not Available | Positive | 1159546 - 1160034 | 17707.9 |
| hypothetical protein | CFN78_05445 | Not Available | Positive | 1161110 - 1161550 | 16397.5 |
| hypothetical protein | CFN78_05450 | Not Available | Positive | 1161606 - 1161947 | 12377.6 |
| spermidine synthase | CFN78_05455 | Not Available | Negative | 1161944 - 1162819 | 31527.3 |
| adenosylmethionine decarboxylase | CFN78_05460 | Not Available | Negative | 1162866 - 1163255 | 13569.2 |
| ornithine decarboxylase | CFN78_05465 | Not Available | Negative | 1163245 - 1164402 | 40179.5 |
| cation acetate symporter | CFN78_05470 | Not Available | Negative | 1164415 - 1166013 | 55604.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
