Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis antarctica |
| Strain | strain AU-G6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935491 bp
Thymine Count
945949 bp
Guanine Count
2238294 bp
Cytosine Count
2223019 bp
Genome Length
6342753 bp
Protein-coding Genes
5495 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CFN78_05120 | Not Available | Positive | 1089248 - 1090729 | 50460.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CFN78_05125 | Not Available | Positive | 1090726 - 1091811 | 38481.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CFN78_05130 | Not Available | Positive | 1091818 - 1093218 | 46898.5 |
| putative lipid ii flippase ftsw | CFN78_05135 | Not Available | Positive | 1093205 - 1094719 | 54151.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CFN78_05140 | Not Available | Positive | 1094716 - 1095888 | 39854.1 |
| udp-n-acetylmuramate--l-alanine ligase | CFN78_05145 | Not Available | Positive | 1095881 - 1097290 | 49032.1 |
| cell division protein ftsq | CFN78_05150 | Not Available | Positive | 1097293 - 1098117 | 29322.1 |
| mini-circle protein | CFN78_05155 | Not Available | Positive | 1098192 - 1098701 | 18734.3 |
| hypothetical protein | CFN78_05160 | Not Available | Negative | 1098676 - 1099500 | 29887.5 |
| sam-dependent methyltransferase | CFN78_05165 | Not Available | Negative | 1099491 - 1100777 | 46723.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
