Rhodococcus sp. NCIMB 12038

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. NCIMB 12038 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain contains a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and growth under favorable conditions. The genomic information for Rhodococcus sp. NCIMB 12038 is available under the accession number NHML00000000.1. Rhodococcus species are known for their metabolic versatility, often enabling them to degrade a wide range of organic compounds, including hydrocarbons and xenobiotics. This trait is particularly relevant in bioremediation applications, where they can be employed to clean up contaminated environments. The presence of flagella suggests that Rhodococcus sp. NCIMB 12038 might also have enhanced mobility, allowing it to navigate through complex environments such as soil or contaminated sites, potentially aiding in its effectiveness for bioremediation processes. The combination of flagella presence and a single replicon in Rhodococcus sp. NCIMB 12038 highlights its potential ecological roles, particularly in environments where organic pollutants are present. The strain's ability to move toward sources of nutrients or away from unfavorable conditions could enhance its survival and degradation capabilities, thereby contributing positively to ecosystem health and resilience in contaminated habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. NCIMB 12038
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. NCIMB 12038 minimus2_contig_3, whole genome

Gene Summary

Adenine Count

1518793 bp

Thymine Count

1519077 bp

Guanine Count

3112837 bp

Cytosine Count

3115000 bp

Genome Length

9266480 bp

Protein-coding Genes

8121 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddCA951_00195Not AvailableNegative63731 - 6409613437.1
ribonuclease p protein componentCA951_00200Not AvailableNegative64093 - 6447013797.9
50s ribosomal protein l34CA951_00205Not AvailableNegative64498 - 646415535.88
chromosomal replication initiation protein dnaaCA951_00210Not AvailablePositive65380 - 6696659172.2
dna polymerase iii subunit betaCA951_00215Not AvailablePositive67627 - 6881141631.7
6-phosphogluconate dehydrogenase (decarboxylating)CA951_00220Not AvailablePositive68873 - 6978432194.0
dna replication/repair protein recfCA951_00225Not AvailablePositive69785 - 7101744726.0
hypothetical proteinCA951_00230Not AvailablePositive71007 - 7157019750.4
metal-dependent hydrolaseCA951_00235Not AvailablePositive71696 - 7260434509.4
oxidoreductaseCA951_00240Not AvailablePositive72601 - 7371940244.1

Displaying genes 41 – 50 of 8178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.