Rhodococcus sp. NCIMB 12038

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. NCIMB 12038 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain contains a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and growth under favorable conditions. The genomic information for Rhodococcus sp. NCIMB 12038 is available under the accession number NHML00000000.1. Rhodococcus species are known for their metabolic versatility, often enabling them to degrade a wide range of organic compounds, including hydrocarbons and xenobiotics. This trait is particularly relevant in bioremediation applications, where they can be employed to clean up contaminated environments. The presence of flagella suggests that Rhodococcus sp. NCIMB 12038 might also have enhanced mobility, allowing it to navigate through complex environments such as soil or contaminated sites, potentially aiding in its effectiveness for bioremediation processes. The combination of flagella presence and a single replicon in Rhodococcus sp. NCIMB 12038 highlights its potential ecological roles, particularly in environments where organic pollutants are present. The strain's ability to move toward sources of nutrients or away from unfavorable conditions could enhance its survival and degradation capabilities, thereby contributing positively to ecosystem health and resilience in contaminated habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. NCIMB 12038
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. NCIMB 12038 minimus2_contig_3, whole genome

Gene Summary

Adenine Count

1518793 bp

Thymine Count

1519077 bp

Guanine Count

3112837 bp

Cytosine Count

3115000 bp

Genome Length

9266480 bp

Protein-coding Genes

8121 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyribonucleaseCA951_00840Not AvailableNegative202107 - 20319536764.6
esteraseCA951_00845Not AvailablePositive203371 - 20436034941.2
aminoacyl-trna hydrolaseCA951_00850Not AvailablePositive204357 - 20481817060.7
siderophore-interacting proteinCA951_00855Not AvailablePositive204944 - 20542316903.3
glyoxalaseCA951_00860Not AvailableNegative205429 - 20577912843.0
atpaseCA951_00865Not AvailableNegative205821 - 20638420673.1
transcriptional regulatorCA951_00870Not AvailableNegative206381 - 20669812296.7
tetr family transcriptional regulatorCA951_00875Not AvailableNegative206732 - 20734923041.0
aminobenzoate oxygenaseCA951_00880Not AvailablePositive207476 - 20840235320.8
4-hydroxyacetophenone monooxygenaseCA951_00885Not AvailablePositive208399 - 21021066897.6

Displaying genes 171 – 180 of 8178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.