Citrobacter werkmanii strain CRK0001

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii strain CRK0001 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy and carbon. This strain is motile, possessing flagella that facilitate movement, which may enhance its ability to navigate diverse environments. The optimal growth conditions for C. werkmanii CRK0001 are within a mesophilic temperature range, suggesting it thrives in moderate temperature environments typically found in soil and water ecosystems. Notably, this strain does not undergo sporulation, indicating a reliance on stable conditions for survival and reproduction rather than forming spores as a means of enduring adverse conditions. With a single replicon, C. werkmanii CRK0001 possesses a simplified genetic structure that may contribute to its adaptability in various ecological niches. The strain is cataloged with the accession number NEYS00000000.2, which allows for further research and reference in microbiological studies. Understanding the characteristics of Citrobacter werkmanii CRK0001 provides insights into its ecological roles, particularly in nutrient cycling within its mesophilic habitat. As a chemoheterotroph, it likely participates in the decomposition of organic matter, contributing to soil fertility and the overall health of its ecosystem. This functional role underscores the importance of studying various microbial species, as they play critical parts in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
Strainstrain CRK0001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii strain CRK0001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii strain CRK0001 CRK0001_NODE_28.ctg_1, whole

Gene Summary

Adenine Count

1223263 bp

Thymine Count

1221690 bp

Guanine Count

1326116 bp

Cytosine Count

1320951 bp

Genome Length

5092020 bp

Protein-coding Genes

4584 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB9081_004455Not AvailableNegative885019 - 88571126572.6
type vi secretion system atpase tsshB9081_004460Not AvailableNegative885704 - 88832896876.3
type vi secretion system tube protein hcpB9081_004465Not AvailableNegative888490 - 88898118756.1
hypothetical proteinB9081_004470Not AvailableNegative888998 - 89066261455.2
dotu family type iv/vi secretion system proteinB9081_004475Not AvailableNegative890666 - 89130724163.7
type vi secretion system baseplate subunit tsskB9081_004480Not AvailableNegative891313 - 89265049231.0
type vi secretion system contractile sheath large subunitB9081_004485Not AvailableNegative892674 - 89420357604.2
type vi secretion system contractile sheath small subunitB9081_004490Not AvailableNegative894269 - 89476618808.6
bifunctional glutathionylspermidine amidase/synthaseB9081_004495Not AvailableNegative895234 - 89709670605.9
cbbbc proteinB9081_004500Not AvailableNegative897250 - 89953883533.3

Displaying genes 961 – 970 of 4841 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.