Citrobacter werkmanii strain CRK0001

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii strain CRK0001 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy and carbon. This strain is motile, possessing flagella that facilitate movement, which may enhance its ability to navigate diverse environments. The optimal growth conditions for C. werkmanii CRK0001 are within a mesophilic temperature range, suggesting it thrives in moderate temperature environments typically found in soil and water ecosystems. Notably, this strain does not undergo sporulation, indicating a reliance on stable conditions for survival and reproduction rather than forming spores as a means of enduring adverse conditions. With a single replicon, C. werkmanii CRK0001 possesses a simplified genetic structure that may contribute to its adaptability in various ecological niches. The strain is cataloged with the accession number NEYS00000000.2, which allows for further research and reference in microbiological studies. Understanding the characteristics of Citrobacter werkmanii CRK0001 provides insights into its ecological roles, particularly in nutrient cycling within its mesophilic habitat. As a chemoheterotroph, it likely participates in the decomposition of organic matter, contributing to soil fertility and the overall health of its ecosystem. This functional role underscores the importance of studying various microbial species, as they play critical parts in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
Strainstrain CRK0001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii strain CRK0001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii strain CRK0001 CRK0001_NODE_28.ctg_1, whole

Gene Summary

Adenine Count

1223263 bp

Thymine Count

1221690 bp

Guanine Count

1326116 bp

Cytosine Count

1320951 bp

Genome Length

5092020 bp

Protein-coding Genes

4584 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleoside-diphosphate reductase subunit alphaB9081_001075Not AvailableNegative206644 - 20892985674.8
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigB9081_001080Not AvailableNegative209350 - 21007826887.3
dna topoisomerase (atp-hydrolyzing) subunit aB9081_001085Not AvailablePositive210237 - 21287397120.9
acetyl-coa c-acetyltransferaseB9081_001090Not AvailableNegative212916 - 21410040483.1
tigr00366 family proteinB9081_001095Not AvailableNegative214131 - 21545347234.2
coa transferase subunit bB9081_001100Not AvailableNegative215450 - 21610022965.2
acetate coa-transferase subunit alphaB9081_001105Not AvailableNegative216103 - 21676223338.5
acetoacetate metabolism regulator atocB9081_001110Not AvailableNegative216961 - 21834652064.1
two-component system sensor histidine kinase atosB9081_001115Not AvailableNegative218343 - 22018167913.0
two-component system sensor histidine kinase rcscB9081_001120Not AvailablePositive220350 - 223196106243.0

Displaying genes 371 – 380 of 4841 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.