Citrobacter werkmanii strain CRK0001

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii strain CRK0001 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy and carbon. This strain is motile, possessing flagella that facilitate movement, which may enhance its ability to navigate diverse environments. The optimal growth conditions for C. werkmanii CRK0001 are within a mesophilic temperature range, suggesting it thrives in moderate temperature environments typically found in soil and water ecosystems. Notably, this strain does not undergo sporulation, indicating a reliance on stable conditions for survival and reproduction rather than forming spores as a means of enduring adverse conditions. With a single replicon, C. werkmanii CRK0001 possesses a simplified genetic structure that may contribute to its adaptability in various ecological niches. The strain is cataloged with the accession number NEYS00000000.2, which allows for further research and reference in microbiological studies. Understanding the characteristics of Citrobacter werkmanii CRK0001 provides insights into its ecological roles, particularly in nutrient cycling within its mesophilic habitat. As a chemoheterotroph, it likely participates in the decomposition of organic matter, contributing to soil fertility and the overall health of its ecosystem. This functional role underscores the importance of studying various microbial species, as they play critical parts in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
Strainstrain CRK0001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii strain CRK0001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii strain CRK0001 CRK0001_NODE_28.ctg_1, whole

Gene Summary

Adenine Count

1223263 bp

Thymine Count

1221690 bp

Guanine Count

1326116 bp

Cytosine Count

1320951 bp

Genome Length

5092020 bp

Protein-coding Genes

4584 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease bnB9081_000925Not AvailableNegative175377 - 17629433074.7
gnat family n-acetyltransferaseB9081_000930Not AvailablePositive176362 - 17682317340.7
stress response protein elabB9081_000935Not AvailablePositive176887 - 17719211533.6
isochorismate synthase menfB9081_000940Not AvailablePositive177297 - 17859548768.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseB9081_000945Not AvailablePositive178683 - 18035361327.5
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseB9081_000950Not AvailablePositive180350 - 18110828015.3
1,4-dihydroxy-2-naphthoyl-coa synthaseB9081_000955Not AvailablePositive181123 - 18198031551.8
o-succinylbenzoate synthaseB9081_000960Not AvailablePositive181980 - 18294235084.1
o-succinylbenzoate--coa ligaseB9081_000965Not AvailablePositive182939 - 18435151383.9
signal transduction protein pmrdB9081_000970Not AvailablePositive184447 - 1847109897.01

Displaying genes 341 – 350 of 4841 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.