Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica


Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaL21SP2_RS00005Not AvailablePositive1 - 145255133.3
dna polymerase iii subunit betaL21SP2_RS00010Not AvailablePositive1686 - 279241833.1
dna replication/repair protein recfL21SP2_RS00015Not AvailablePositive2831 - 391941557.8
duf721 domain-containing proteinL21SP2_RS00020Not AvailablePositive3925 - 447320545.4
50s ribosomal protein l34L21SP2_RS00025Not AvailablePositive4616 - 47716242.79
membrane protein insertase yidcL21SP2_RS00035Not AvailablePositive5197 - 702668974.0
rna-binding cell elongation regulator jag/elorL21SP2_RS00040Not AvailablePositive7051 - 775827027.2
glycine cleavage system aminomethyltransferase gcvtL21SP2_RS00045Not AvailablePositive8133 - 924841986.9
glycine cleavage system protein gcvhL21SP2_RS00050Not AvailablePositive9353 - 974214132.2
aminomethyl-transferring glycine dehydrogenase subunit gcvpaL21SP2_RS00055Not AvailablePositive9742 - 1107349155.4

Displaying genes 1 – 10 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.