Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica, complete sequence.

Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinL21SP2_RS14665Not AvailablePositive3366361 - 336756946689.2
type ii toxin-antitoxin system yafq family toxinL21SP2_RS14670Not AvailableNegative3367644 - 336792510993.5
type ii toxin-antitoxin system phd/yefm family antitoxinL21SP2_RS14675Not AvailableNegative3367918 - 33681729417.07
toxin-antitoxin system hicb family antitoxinL21SP2_RS14680Not AvailablePositive3368389 - 336866110457.6
duf2442 domain-containing proteinL21SP2_RS19095Not AvailableNegative3368774 - 336907011418.6
duf4160 domain-containing proteinL21SP2_RS14690Not AvailableNegative3369079 - 336933910192.5
glycosyltransferase family 4 proteinL21SP2_RS14695Not AvailableNegative3369857 - 337096339607.6
hypothetical proteinL21SP2_RS14700Not AvailableNegative3371047 - 337246551558.9
outer membrane lipoprotein-sorting proteinL21SP2_RS14705Not AvailableNegative3372465 - 337322628598.0
abc transporter permeaseL21SP2_RS14710Not AvailableNegative3373317 - 337460347244.7

Displaying genes 2921 – 2930 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.