Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica, complete sequence.

Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaL21SP2_RS08635Not AvailableNegative1947573 - 194820823118.6
crossover junction endodeoxyribonuclease ruvcL21SP2_RS08640Not AvailableNegative1948205 - 194870517602.2
yebc/pmpr family dna-binding transcriptional regulatorL21SP2_RS08645Not AvailableNegative1948698 - 194944126807.3
signal peptidase iL21SP2_RS08650Not AvailableNegative1949652 - 195032925583.5
ssra-binding protein smpbL21SP2_RS08655Not AvailablePositive1950509 - 195096717707.7
inositol monophosphatase family proteinL21SP2_RS08660Not AvailablePositive1950976 - 195177629135.5
Tmrna,resume consensus sequence (at 78): tataactgctaacgatgcNot AvailableNot AvailablePositive1951909 - 1952255Not Available
hypothetical proteinL21SP2_RS08665Not AvailablePositive1952369 - 195356547126.8
hypothetical proteinL21SP2_RS18385Not AvailablePositive1953753 - 195431021105.8
duf6320 domain-containing proteinL21SP2_RS08670Not AvailableNegative1954246 - 195511231613.5

Displaying genes 1721 – 1730 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.