Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica, complete sequence.

Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
muts-related proteinL21SP2_RS18875Not AvailableNegative1932547 - 193328727097.5
dna mismatch repair protein mutsL21SP2_RS08590Not AvailableNegative1933248 - 193515571941.3
stas domain-containing proteinL21SP2_RS08595Not AvailablePositive1935266 - 193576018611.4
omph family outer membrane proteinL21SP2_RS08600Not AvailableNegative1935920 - 193645320372.0
outer membrane protein assembly factor bamaL21SP2_RS08605Not AvailableNegative1936570 - 1939251101113.0
translocation/assembly module tamb domain-containing proteinL21SP2_RS08610Not AvailableNegative1939275 - 1943894168589.0
dtmp kinaseL21SP2_RS08615Not AvailablePositive1943973 - 194460824160.8
hypothetical proteinL21SP2_RS08620Not AvailablePositive1944635 - 194522524037.4
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaL21SP2_RS08625Not AvailableNegative1945362 - 194648942510.1
holliday junction branch migration dna helicase ruvbL21SP2_RS08630Not AvailableNegative1946464 - 194756440682.6

Displaying genes 1711 – 1720 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.