Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica, complete sequence.

Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor abc transporter atp-binding proteinL21SP2_RS07870Not AvailableNegative1783333 - 178406727358.2
biotin transporter bioyL21SP2_RS07875Not AvailableNegative1784054 - 178465921149.7
d-alanyl-d-alanine carboxypeptidase family proteinL21SP2_RS17125Not AvailablePositive1784721 - 178621455277.8
dihydroorotate dehydrogenase-like proteinL21SP2_RS07885Not AvailableNegative1786216 - 178719035946.9
superoxide dismutaseL21SP2_RS07890Not AvailablePositive1787337 - 178794522687.7
aminotransferase class v-fold plp-dependent enzymeL21SP2_RS07895Not AvailablePositive1788229 - 178947046372.4
iron-sulfur cluster assembly scaffold proteinL21SP2_RS17130Not AvailablePositive1789536 - 179003318627.1
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseL21SP2_RS07905Not AvailablePositive1790266 - 179101228244.7
pega domain-containing proteinL21SP2_RS07910Not AvailableNegative1791122 - 179187427885.0
carboxypeptidase-like regulatory domain-containing proteinL21SP2_RS07915Not AvailableNegative1791874 - 179283333827.1

Displaying genes 1561 – 1570 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.