Salinispira pacifica

anaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Salinispira

Description

Salinispira pacifica is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is crucial for its survival and metabolism, allowing it to inhabit specific ecological niches where oxygen is limited. The organism possesses a single replicon, indicating that its genetic material is organized in one circular chromosome, which is common in many prokaryotes. The genetic sequence of Salinispira pacifica can be found under the accession number NC_023035.1. This accession provides a reference point for researchers interested in the genetic characteristics and potential applications of this bacterium. Understanding the anaerobic nature of Salinispira pacifica is vital for ecological studies, especially in marine environments where oxygen gradients can significantly impact microbial community dynamics. Anaerobic bacteria like Salinispira pacifica play essential roles in biogeochemical cycles, including the degradation of organic matter and nutrient recycling in anoxic conditions. Their presence can influence the overall health and stability of marine ecosystems, highlighting the importance of studying such microorganisms in the context of environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSalinispira
SpeciesSalinispira pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinispira pacifica
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinispira pacifica, complete sequence.

Gene Summary

Adenine Count

913483 bp

Thymine Count

907543 bp

Guanine Count

979668 bp

Cytosine Count

982104 bp

Genome Length

3782798 bp

Protein-coding Genes

3236 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyprenyl diphosphate synthaseL21SP2_RS06205Not AvailableNegative1397955 - 139865326763.6
ribosome recycling factorL21SP2_RS06210Not AvailableNegative1398650 - 139920421055.0
translation elongation factor tsL21SP2_RS06215Not AvailableNegative1399308 - 140015330604.5
30s ribosomal protein s2L21SP2_RS06220Not AvailableNegative1400258 - 140123236103.7
maf family proteinL21SP2_RS06225Not AvailableNegative1401391 - 140207724666.3
hypothetical proteinL21SP2_RS06230Not AvailableNegative1402182 - 14024188425.71
Trna-argNot AvailableNot AvailablePositive1402532 - 1402605Not Available
radical sam proteinL21SP2_RS06240Not AvailablePositive1402851 - 140384937665.5
gx transporter family proteinL21SP2_RS18330Not AvailablePositive1403839 - 140528152129.1
glycine c-acetyltransferaseL21SP2_RS06250Not AvailablePositive1405322 - 140650943896.0

Displaying genes 1231 – 1240 of 3289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.