Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | ATCC 49512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1082092 bp
Thymine Count
1085296 bp
Guanine Count
495287 bp
Cytosine Count
499757 bp
Genome Length
3162432 bp
Protein-coding Genes
2683 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gumc family protein | FCOL_RS12850 | Not Available | Positive | 2939160 - 2941529 | 89403.6 |
| is982 family transposase | FCOL_RS14745 | Not Available | Positive | 2941939 - 2942966 | 37726.8 |
| transposase | FCOL_RS12865 | Not Available | Positive | 2942993 - 2943172 | 6967.44 |
| is3 family transposase | FCOL_RS12870 | Not Available | Positive | 2943259 - 2944173 | 36839.8 |
| acyltransferase family protein | FCOL_RS12875 | Not Available | Negative | 2944446 - 2945636 | 46179.8 |
| tyrosine-protein phosphatase | FCOL_RS12880 | Not Available | Negative | 2945889 - 2946626 | 28542.9 |
| abc transporter permease | FCOL_RS12885 | Not Available | Positive | 2946753 - 2947616 | 33323.8 |
| abc transporter atp-binding protein | FCOL_RS14350 | Not Available | Positive | 2947619 - 2948905 | 48467.0 |
| hypothetical protein | FCOL_RS12895 | Not Available | Positive | 2948916 - 2949800 | 34827.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | FCOL_RS12900 | Not Available | Positive | 2950245 - 2951378 | 42423.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
