Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | ATCC 49512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1082092 bp
Thymine Count
1085296 bp
Guanine Count
495287 bp
Cytosine Count
499757 bp
Genome Length
3162432 bp
Protein-coding Genes
2683 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dual specificity protein phosphatase family protein | FCOL_RS00995 | Not Available | Negative | 231457 - 232026 | 21822.1 |
| lta synthase family protein | FCOL_RS01000 | Not Available | Negative | 232026 - 233948 | 74707.5 |
| l-serine ammonia-lyase | FCOL_RS01005 | Not Available | Positive | 234071 - 235495 | 52382.1 |
| hopj type iii effector protein | FCOL_RS01010 | Not Available | Positive | 235681 - 236013 | 12753.1 |
| single-stranded-dna-specific exonuclease recj | FCOL_RS01015 | Not Available | Positive | 236352 - 238040 | 63190.8 |
| mfs transporter | FCOL_RS01020 | Not Available | Positive | 238451 - 239632 | 42764.5 |
| ybab/ebfc family nucleoid-associated protein | FCOL_RS01025 | Not Available | Negative | 239923 - 240249 | 11943.6 |
| s9 family peptidase | FCOL_RS01030 | Not Available | Positive | 240331 - 242391 | 79307.4 |
| plp-dependent cysteine synthase family protein | FCOL_RS01035 | Not Available | Positive | 242442 - 243479 | 38494.5 |
| duf4494 domain-containing protein | FCOL_RS01040 | Not Available | Negative | 243763 - 244326 | 21818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
