Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | ATCC 49512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1082092 bp
Thymine Count
1085296 bp
Guanine Count
495287 bp
Cytosine Count
499757 bp
Genome Length
3162432 bp
Protein-coding Genes
2683 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | FCOL_RS11205 | Not Available | Negative | 2570513 - 2572141 | 57725.2 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | FCOL_RS11210 | Not Available | Negative | 2572148 - 2573146 | 37457.0 |
| cytidine deaminase | FCOL_RS11215 | Not Available | Negative | 2573317 - 2573799 | 17760.3 |
| type ix secretion system outer membrane channel protein porv | FCOL_RS11220 | Not Available | Negative | 2573875 - 2575065 | 43924.4 |
| type ix secretion system sortase poru | FCOL_RS11225 | Not Available | Negative | 2575104 - 2578928 | 143396.0 |
| gliding motility lipoprotein gldj | FCOL_RS11230 | Not Available | Positive | 2579127 - 2580848 | 65066.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | FCOL_RS11235 | Not Available | Positive | 2580913 - 2582196 | 48145.3 |
| outer membrane beta-barrel protein | FCOL_RS11240 | Not Available | Positive | 2582548 - 2583243 | 26249.9 |
| outer membrane beta-barrel protein | FCOL_RS11245 | Not Available | Positive | 2583262 - 2583987 | 27926.0 |
| t9ss type a sorting domain-containing protein | FCOL_RS11250 | Not Available | Positive | 2584165 - 2586078 | 73238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
