Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | ATCC 49512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1082092 bp
Thymine Count
1085296 bp
Guanine Count
495287 bp
Cytosine Count
499757 bp
Genome Length
3162432 bp
Protein-coding Genes
2683 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | FCOL_RS10660 | Not Available | Positive | 2433772 - 2434134 | 13869.4 |
| deoxyribose-phosphate aldolase | FCOL_RS10665 | Not Available | Positive | 2434197 - 2434940 | 27248.6 |
| hypothetical protein | FCOL_RS10670 | Not Available | Positive | 2434953 - 2437043 | 79990.2 |
| ompa family protein | FCOL_RS10675 | Not Available | Negative | 2437259 - 2439214 | 73416.7 |
| type ix secretion system membrane protein porp/sprf | FCOL_RS10680 | Not Available | Negative | 2439225 - 2440139 | 34280.8 |
| t9ss c-terminal target domain-containing protein | FCOL_RS10685 | Not Available | Negative | 2440194 - 2447615 | 250795.0 |
| t9ss type a sorting domain-containing protein | FCOL_RS10690 | Not Available | Negative | 2448413 - 2450242 | 68075.3 |
| hypothetical protein | FCOL_RS14630 | Not Available | Negative | 2450289 - 2450441 | 5569.96 |
| response regulator transcription factor | FCOL_RS10695 | Not Available | Negative | 2450784 - 2451395 | 22889.7 |
| sensor histidine kinase | FCOL_RS10700 | Not Available | Negative | 2451395 - 2453089 | 64858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
