Flavobacterium columnare ATCC 49512

Gram-negativeRodMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium columnare ATCC 49512 is a Gram-negative, rod-shaped bacterium recognized for its pathogenicity specifically in fish. This organism is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, and it exhibits facultative anaerobic respiration, allowing it to thrive in various oxygen conditions. The bacterium is mesophilic, meaning it prefers moderate temperature ranges, which aligns with the environmental conditions typical of many aquatic habitats where it is found. Flavobacterium columnare is motile due to the presence of flagella, facilitating its movement within its diverse habitats. Notably, Flavobacterium columnare does not form spores, which suggests a reliance on other survival strategies under adverse conditions. With one replicon in its genome, it has a relatively simple genetic organization compared to more complex organisms. Ecologically, the presence of Flavobacterium columnare in aquatic environments can have significant implications for fish populations, as it is known to be a pathogen affecting various fish species. Outbreaks of disease caused by this bacterium can lead to substantial economic losses in aquaculture and impact natural fish populations. Understanding the traits and ecological role of Flavobacterium columnare is crucial for managing fish health and developing strategies to mitigate its pathogenic effects.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium columnare
StrainATCC 49512

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium columnare ATCC 49512
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
Pathogenicityfish

Genome Summary

Flavobacterium columnare ATCC 49512, complete sequence.

Gene Summary

Adenine Count

1082092 bp

Thymine Count

1085296 bp

Guanine Count

495287 bp

Cytosine Count

499757 bp

Genome Length

3162432 bp

Protein-coding Genes

2683 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2490 domain-containing proteinFCOL_RS05210Not AvailableNegative1191394 - 119215529550.5
alpha-ribazole phosphataseFCOL_RS05215Not AvailableNegative1192342 - 119287220780.4
adenosylcobinamide-gdp ribazoletransferaseFCOL_RS05220Not AvailableNegative1192857 - 119365729918.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseFCOL_RS05225Not AvailableNegative1193693 - 119470036286.0
diphthine--ammonia ligaseFCOL_RS05230Not AvailableNegative1194712 - 119535624695.1
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseFCOL_RS05235Not AvailableNegative1195401 - 119590719449.4
mechanosensitive ion channel domain-containing proteinFCOL_RS05240Not AvailablePositive1196028 - 119653719227.9
abc transporter substrate-binding proteinFCOL_RS05245Not AvailablePositive1196639 - 119777843166.1
iron abc transporter permeaseFCOL_RS05250Not AvailablePositive1197784 - 119879436815.0
abc transporter atp-binding proteinFCOL_RS05255Not AvailablePositive1198794 - 119957629260.9

Displaying genes 1081 – 1090 of 2791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.