Treponema primitia ZAS-2

Gram-negativeSpirillaNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema primitia ZAS-2 is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and single-cell arrangement. This organism is non-motile and possesses flagella, which may play a role in its function within host-associated environments. Treponema primitia ZAS-2 is categorized as mesophilic, indicating that it thrives in moderate temperature ranges, suitable for many biological systems. This bacterium is notable for its symbiotic relationship with its host, suggesting that it may play a role in the host's biological processes, potentially contributing to mutual benefits in nutrient acquisition or metabolic functions. The organism has a single replicon, which is a characteristic of its genome structure, and it does not form spores, indicating a reliance on direct growth rather than dormancy for survival. The accession number for Treponema primitia ZAS-2 is NC_015578.1, which provides a reference for further genetic and genomic studies. Understanding the traits of Treponema primitia ZAS-2 enhances our knowledge of microbial diversity and the complex interactions that occur within host-associated microbiomes. The ecological insight gained from studying such symbiotic bacteria can inform us about their roles in health, disease, and the overall balance of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema primitia
StrainZAS-2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema primitia ZAS-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema primitia ZAS-2


Gene Summary

Adenine Count

1001990 bp

Thymine Count

993941 bp

Guanine Count

1031028 bp

Cytosine Count

1032908 bp

Genome Length

4059867 bp

Protein-coding Genes

3497 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaTREPR_RS00010Not AvailablePositive301 - 174054311.2
dna polymerase iii subunit betaTREPR_RS00015Not AvailablePositive1938 - 304141719.6
dna replication/repair protein recfTREPR_RS00020Not AvailablePositive3065 - 417442149.3
duf721 domain-containing proteinTREPR_RS00025Not AvailablePositive4171 - 474920756.2
hypothetical proteinTREPR_RS00030Not AvailablePositive4753 - 596144025.8
hypothetical proteinTREPR_RS00035Not AvailableNegative6003 - 679129493.5
rsme family rna methyltransferaseTREPR_RS00040Not AvailableNegative6801 - 766130861.2
sugar abc transporter atp-binding proteinTREPR_RS00045Not AvailablePositive7819 - 931254883.8
abc transporter permeaseTREPR_RS00050Not AvailablePositive9328 - 1029332698.1
abc transporter substrate-binding proteinTREPR_RS00055Not AvailablePositive10349 - 1129032975.6

Displaying genes 1 – 10 of 3556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014050Vanillic acidC8H8O4Chemical structure of Vanillic acid121-34-6
Average168.148Da
Monoisotopic168.042258738Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.