Treponema primitia ZAS-2

Gram-negativeSpirillaNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema primitia ZAS-2 is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and single-cell arrangement. This organism is non-motile and possesses flagella, which may play a role in its function within host-associated environments. Treponema primitia ZAS-2 is categorized as mesophilic, indicating that it thrives in moderate temperature ranges, suitable for many biological systems. This bacterium is notable for its symbiotic relationship with its host, suggesting that it may play a role in the host's biological processes, potentially contributing to mutual benefits in nutrient acquisition or metabolic functions. The organism has a single replicon, which is a characteristic of its genome structure, and it does not form spores, indicating a reliance on direct growth rather than dormancy for survival. The accession number for Treponema primitia ZAS-2 is NC_015578.1, which provides a reference for further genetic and genomic studies. Understanding the traits of Treponema primitia ZAS-2 enhances our knowledge of microbial diversity and the complex interactions that occur within host-associated microbiomes. The ecological insight gained from studying such symbiotic bacteria can inform us about their roles in health, disease, and the overall balance of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema primitia
StrainZAS-2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema primitia ZAS-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema primitia ZAS-2, complete sequence.

Gene Summary

Adenine Count

1001990 bp

Thymine Count

993941 bp

Guanine Count

1031028 bp

Cytosine Count

1032908 bp

Genome Length

4059867 bp

Protein-coding Genes

3497 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bmp family proteinTREPR_RS02790Not AvailableNegative635847 - 63689636979.4
bifunctional metallophosphatase/5'-nucleotidaseTREPR_RS02795Not AvailableNegative637013 - 63894170011.4
hypothetical proteinTREPR_RS02800Not AvailableNegative639012 - 63964122981.1
tatd family hydrolaseTREPR_RS02805Not AvailableNegative640086 - 64094631237.7
Trna-leuNot AvailableNot AvailablePositive640994 - 641076Not Available
glutamine synthetase iiiTREPR_RS02815Not AvailableNegative641148 - 64329278610.2
sensor histidine kinaseTREPR_RS02820Not AvailableNegative643589 - 64481845662.2
hypothetical proteinTREPR_RS02825Not AvailablePositive644883 - 64550323173.0
hypothetical proteinTREPR_RS02830Not AvailableNegative645607 - 6458017373.05
hypothetical proteinTREPR_RS17770Not AvailableNegative645813 - 64803575766.0

Displaying genes 571 – 580 of 3556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014050Vanillic acidC8H8O4Chemical structure of Vanillic acid121-34-6
Average168.148Da
Monoisotopic168.042258738Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.