Pseudonocardia dioxanivorans CB1190

Gram-positiverodAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia dioxanivorans CB1190 is a Gram-positive bacterium characterized by its rod shape and non-motility. This species is aerobic, thriving in environments with sufficient oxygen. Its optimal growth temperature is 30°C, and it falls within the mesophilic temperature range. Notably, P. dioxanivorans is free-living and has been identified in fresh water sludge habitats. This bacterium possesses two replicons, which may contribute to its genetic diversity and adaptability. Pseudonocardia dioxanivorans is known to interact with a variety of hosts, including Homo sapiens, members of the Viridiplantae, Insecta, and multiple species within the Formicidae family, such as Acromyrmex and Trachymyrmex. This wide host range indicates a potential ecological versatility, allowing it to thrive in various environments. However, it is important to note that Pseudonocardia dioxanivorans has been associated with infections in its hosts, which may raise concerns regarding its pathogenic potential. Given its presence in diverse ecosystems and its free-living nature, P. dioxanivorans could play a role in nutrient cycling and organic matter decomposition in freshwater habitats, influencing both microbial community dynamics and the health of associated organisms. The duality of its ecological role and potential for infection underscores the need for further research into its interactions within microbial and host communities. Accessions for this species include NC_015312.1 and NC_015313.1.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia dioxanivorans
StrainCB1190

Profile

Physiology
Gram staining propertiesPositive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatFresh water - Sludge
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Insecta
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia dioxanivorans CB1190, complete sequence.

Gene Summary

Adenine Count

947176 bp

Thymine Count

946932 bp

Guanine Count

2599069 bp

Cytosine Count

2603394 bp

Genome Length

7096571 bp

Protein-coding Genes

6674 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
whib family transcriptional regulatorPSED_RS26150Not AvailableNegative5568332 - 55685839267.85
site-2 protease family proteinPSED_RS26155Not AvailablePositive5568825 - 556957726313.9
nudix hydrolasePSED_RS26160Not AvailableNegative5569550 - 557011019905.6
coenzyme f420-0:l-glutamate ligasePSED_RS26165Not AvailableNegative5570104 - 557146847800.9
2-phospho-l-lactate transferasePSED_RS26170Not AvailableNegative5571461 - 557246834895.8
glutathione peroxidasePSED_RS26175Not AvailableNegative5572524 - 557300917017.0
dna-3-methyladenine glycosylasePSED_RS26180Not AvailableNegative5573128 - 557404533520.9
sugar phosphate nucleotidyltransferasePSED_RS26185Not AvailableNegative5574049 - 557516738217.5
glycosyltransferase family 2 proteinPSED_RS26190Not AvailableNegative5575164 - 557591925201.2
hypothetical proteinPSED_RS26195Not AvailableNegative5576309 - 557795856865.8

Displaying genes 5301 – 5310 of 6763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039992Bacillus firmus DS1Not available24218-00-6Not available

Displaying 1–3 of 3 metabolites

Health Effects

Health ConditionRelationReference
InfectionsCausesPMC12139244

Displaying health effects 1 – 1 of 1 in total