Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia dioxanivorans |
| Strain | CB1190 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Fresh water - Sludge |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Viridiplantae, Insecta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
947176 bp
Thymine Count
946932 bp
Guanine Count
2599069 bp
Cytosine Count
2603394 bp
Genome Length
7096571 bp
Protein-coding Genes
6674 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PSED_RS23685 | Not Available | Negative | 5046210 - 5047352 | 40171.6 |
| nucleotidase | PSED_RS23690 | Not Available | Negative | 5047461 - 5047952 | 18840.2 |
| rip metalloprotease | PSED_RS23695 | Not Available | Negative | 5047955 - 5049151 | 42529.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PSED_RS23700 | Not Available | Negative | 5049155 - 5050375 | 41287.9 |
| duf2631 domain-containing protein | PSED_RS23705 | Not Available | Positive | 5050464 - 5050724 | 9523.74 |
| non-homologous end-joining dna ligase | PSED_RS23710 | Not Available | Positive | 5050741 - 5051712 | 36642.8 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | PSED_RS23715 | Not Available | Negative | 5051764 - 5052402 | 23206.8 |
| marr family winged helix-turn-helix transcriptional regulator | PSED_RS23720 | Not Available | Positive | 5052467 - 5052904 | 15636.6 |
| g/u mismatch-specific dna glycosylase | PSED_RS23725 | Not Available | Negative | 5052895 - 5053482 | 20834.7 |
| atp-dependent dna ligase | PSED_RS23730 | Not Available | Positive | 5053537 - 5054607 | 40376.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
